Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015951953.1_cds_XP_016491841.1_82117
CDS Infomation

[gene=LOC107811430] [db_xref=GeneID:107811430] [protein=protein DEFECTIVE IN EXINE FORMATION 1-like isoform X2] [protein_id=XP_016491841.1] [location=join(67835..67856,67931..68098,68755..69335,69432..69502,70116..70372,71472..71937,72047..72164,72238..72420,72502..72810)] [gbkey=CDS]
Sequence

ATGGTGAGGTGCTCTTTTTCAGATTTACATAGGGTCTCAGGATACTTGATGTCGGATAAA
TTGGAGATTCCTCGGCTGAGAGTTAAAAAAGATTGGCATGTGGGTTTGAATCTGGACCCA
GTAGACCGTTCTCATCCAGACGTCCATGATGACCAACTCATACAGGAGGCTGTCAAGGAC
TCTATTGCCCGTCACAATGCATCTACTCATGGAGGCAATCATTCAAAGTCTACTGCATCA
GAAGTTAACACGGAAACCCATTCTATTCAAAAAGAAGCCAACCATGATGCATCATCTAAT
GCTTCAATATCTTTGCCATCAGAAGTTTCACCTAACACATCAAATTCATCTAATTTAGAG
GACCAAAAGGGGAAGAATGATAGTCTAGCTGATGCAGAAGTTAAAATCACTAACTTGAGC
AATATTACTCTGAGTTCTGATAATGAGAAACTTAGCAATTTGGAGAATGGAACAAGTAAG
GGGAGAAGGCTTCTTGAAGATGATGTCTTGAGAAGATCAGAGGAAAGTGGTTCCAGATCC
GAAGATGTTAGAGCTGCAACTGTGGAAAATGAAGAAGGTCTGGAAGCGGATGCTGATTCA
TCTTTTGAGTTATTCCGAGATAATGAGGAGCTGCCTGATGATTATGATTATGACTATGAT
GATTACCTTGATGATGATGAAGAAGAATGGAGAGGTGAAGATTTTGATGAAGCAGAACAC
GAAAAATTGGAGAATTATGTTCATATTGATGCTCATGTTTTATGTACTCCTGTCATTGCT
GACATTGACAGTGACGGGGTGTCAGAGATGATTGTTGCAGTATCCTACTTCTTTGACCAT
GAGTACTACAACAATCAGGAGCATTTGAAGGAACTTGGAGACATTGACATAGAAAAATAT
GTCGCTGGTGGTATTGTTGTTTTTAATCTAGAAACCAAGCAAGTTAAATGGACTGCACAG
CTGGACCTAAGTACTGACAATGGGAACTTCCGTGGCTATATATACTCTTCTCCTACCGTG
ATTGATTTGGATGGTGATGGAAAATTGGACATTCTAGTTGGGACCTCTTATGGCTTGTTT
TATGTGTTGGATCACAACGGCAAAGTGAGGGATAAGTTTCCTCTCGAAATGGCTGAAATC
CAAGGAGCAGTAGTTGCAGCTGATATCAATGATGATGGCAAGATTGAACTAGTTACCACA
GATTCACATGGAAATGTTGCTGCTTGGACTGCACAGGGCACAGAAATTTGGGAAAAGCAT
CTCAAGAGCCTAGTTCCTCAGGGTCCTACCATTGGTGATGTGGATGGAGATGGCCATACA
GATGTTGTTTTCCCAACACTTTCAGGGAATATATATGTTCTGAGTGGCAAGGATGGTTCA
TTTGTACGTCCATATCCTTATAGGACTCATGGTAGAGTGATGAATCGAGTTCTTCTAGTT
GATTTGAGCAAACGTGGGGAGAAGAAAAAAGGGCTTACCATTGTCACGACGTCATTTGAT
GGTTATTTGTATCTCATAGACGGACCAACATCATGTGCTGATGTTGTAGATATTGGTGAA
ACTTCATACAGCATGGTCTTGGCTGACAACGTTGATGGCGGAGATGACCTTGATCTTATT
GTAACAACCATGAATGGTAATGTCTTCTGTTTCTCCACGCCTGCTCCACATCATCCCCTC
AAAGCTTGGAGATCTCCTAACCAAGGGAGAAACAATGCTGCTTACCGTAATGATCGTGAG
GGGATCTATGCAACTCCATCTTCAAGAGCTTTCCGTGATGAAGAAGGCAAGAGCTTCTGG
GTTGAAATAGAAATTGTTGATAAATACAGATACCCATATGGGTCCCAAGCTCCTTATAAT
GTCACGGTGAGCTTGTTAGTTCCTGGTAATTACCAAGGGGAACGAACTGTCAAGCAAAAT
AAGATATTCAACCGTCCTGGAAAACATCGTATTATGCTCCCAACTGTTAGTGTGAGGACT
GCTGGGACTGTATTGTTGGAGATGGTTGACAAGAATGGGCTATATTTCTCTGATGATTTC
TCTCTAACGTTCCATATGTATTATTATAAGTTATTGAAATGGCTTCTCGTACTCCCTATG
CTGGGGATGTTTGGTGTCCTTGTAATCCTTCGTCCGCAGGAGGCCATGCCACTACCATCA
TTTTCACGGAACTGA

Peptide Sequence

PEP ID

XP_016491841.1
PEP Infomation

PREDICTED: protein DEFECTIVE IN EXINE FORMATION 1-like isoform X2 [Nicotiana tabacum]
Sequence

MVRCSFSDLHRVSGYLMSDKLEIPRLRVKKDWHVGLNLDPVDRSHPDVHDDQLIQEAVKD
SIARHNASTHGGNHSKSTASEVNTETHSIQKEANHDASSNASISLPSEVSPNTSNSSNLE
DQKGKNDSLADAEVKITNLSNITLSSDNEKLSNLENGTSKGRRLLEDDVLRRSEESGSRS
EDVRAATVENEEGLEADADSSFELFRDNEELPDDYDYDYDDYLDDDEEEWRGEDFDEAEH
EKLENYVHIDAHVLCTPVIADIDSDGVSEMIVAVSYFFDHEYYNNQEHLKELGDIDIEKY
VAGGIVVFNLETKQVKWTAQLDLSTDNGNFRGYIYSSPTVIDLDGDGKLDILVGTSYGLF
YVLDHNGKVRDKFPLEMAEIQGAVVAADINDDGKIELVTTDSHGNVAAWTAQGTEIWEKH
LKSLVPQGPTIGDVDGDGHTDVVFPTLSGNIYVLSGKDGSFVRPYPYRTHGRVMNRVLLV
DLSKRGEKKKGLTIVTTSFDGYLYLIDGPTSCADVVDIGETSYSMVLADNVDGGDDLDLI
VTTMNGNVFCFSTPAPHHPLKAWRSPNQGRNNAAYRNDREGIYATPSSRAFRDEEGKSFW
VEIEIVDKYRYPYGSQAPYNVTVSLLVPGNYQGERTVKQNKIFNRPGKHRIMLPTVSVRT
AGTVLLEMVDKNGLYFSDDFSLTFHMYYYKLLKWLLVLPMLGMFGVLVILRPQEAMPLPS
FSRN

Transcript Sequence

Gene sequence data has not been registered.